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AKR1A1 aldo-keto reductase family 1 member A1 [ Pantherophis guttatus ]

Gene ID: 117664127, updated on 11-Apr-2024

Summary

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Gene symbol
AKR1A1
Gene description
aldo-keto reductase family 1 member A1
See related
EnsemblRapid:ENSPGUG00005015394
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See AKR1A1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844027.1 (46568614..46591448, complement)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010716.1 (35375834..35398732, complement)

NW_026844027.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain containing 17 Neighboring gene nuclear autoantigenic sperm protein Neighboring gene peroxiredoxin 1 Neighboring gene selenoprotein Pb-like Neighboring gene 4-hydroxyphenylpyruvate dioxygenase like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables aldose reductase (NADPH) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in aldehyde catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aldo-keto reductase family 1 member A1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844027.1 Reference CU_Pguttatus_1

    Range
    46568614..46591448 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034414930.2 → XP_034270821.1  aldo-keto reductase family 1 member A1

    UniProtKB/TrEMBL
    A0A6P9BS71
    Related
    ENSPGUP00005021863.1
    Conserved Domains (1) summary
    cd19106
    Location:10 → 314
    AKR_AKR1A1-4; AKR1A family of aldo-keto reductase (AKR)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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