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INPP5B inositol polyphosphate-5-phosphatase B [ Pantherophis guttatus ]

Gene ID: 117663282, updated on 19-Mar-2024

Summary

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Gene symbol
INPP5B
Gene description
inositol polyphosphate-5-phosphatase B
See related
EnsemblRapid:ENSPGUG00005019206
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See INPP5B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
23
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844034.1 (4179142..4208578)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010715.1 (4123312..4152624)

NW_026844034.1Genomic Context describing neighboring genes Neighboring gene splicing factor 3a subunit 3 Neighboring gene uncharacterized LOC117663515 Neighboring gene metal regulatory transcription factor 1 Neighboring gene yrdC N6-threonylcarbamoyltransferase domain containing

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables inositol-1,4,5-trisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol-4,5-bisphosphate 5-phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
type II inositol 1,4,5-trisphosphate 5-phosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844034.1 Reference CU_Pguttatus_1

    Range
    4179142..4208578
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034413317.2 → XP_034269208.1  type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X1

    UniProtKB/TrEMBL
    A0A6P9BEC1
    Related
    ENSPGUP00005027378.1
    Conserved Domains (3) summary
    cd04380
    Location:662 → 879
    RhoGAP_OCRL1; RhoGAP (GTPase-activator protein [GAP] for Rho-like small GTPases) domain present in OCRL1-like proteins. OCRL1 (oculocerebrorenal syndrome of Lowe 1)-like proteins contain two conserved domains: a central inositol polyphosphate 5-phosphatase domain and ...
    cl00490
    Location:237 → 528
    EEP; Exonuclease-Endonuclease-Phosphatase (EEP) domain superfamily
    cl17171
    Location:1 → 125
    PH-like; Pleckstrin homology-like domain

  2. XM_060691402.1 → XP_060547385.1  type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X5

  3. XM_060691401.1 → XP_060547384.1  type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X4

  4. XM_060691399.1 → XP_060547382.1  type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X2

  5. XM_060691400.1 → XP_060547383.1  type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X3

  6. XM_060691403.1 → XP_060547386.1  type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X6

  7. XM_060691404.1 → XP_060547387.1  type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X7

  8. XM_060691405.1 → XP_060547388.1  type II inositol 1,4,5-trisphosphate 5-phosphatase isoform X7

Nucleotide Protein
Heading Accession and Version

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