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ALDOB aldolase, fructose-bisphosphate B [ Pantherophis guttatus ]

Gene ID: 117661599, updated on 19-Mar-2024

Summary

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Gene symbol
ALDOB
Gene description
aldolase, fructose-bisphosphate B
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See ALDOB in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844028.1 (20139340..20158772)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010706.1 (33030208..33049714, complement)

NW_026844028.1Genomic Context describing neighboring genes Neighboring gene glutamate ionotropic receptor NMDA type subunit 3A Neighboring gene ring finger protein 20 Neighboring gene post-GPI attachment to proteins GalNAc transferase 4 Neighboring gene mitochondrial ribosomal protein L50 Neighboring gene phospholipid phosphatase related 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables fructose-1-phosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables fructose-bisphosphate aldolase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in fructose 1,6-bisphosphate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycolytic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
fructose-bisphosphate aldolase B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844028.1 Reference CU_Pguttatus_1

    Range
    20139340..20158772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034410621.2 → XP_034266512.1  fructose-bisphosphate aldolase B

    UniProtKB/TrEMBL
    A0A6P9B5J7
    Conserved Domains (1) summary
    pfam00274
    Location:16 → 364
    Glycolytic; Fructose-bisphosphate aldolase class-I
Nucleotide Protein
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