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PIP5K1B phosphatidylinositol-4-phosphate 5-kinase type 1 beta [ Pantherophis guttatus ]

Gene ID: 117661466, updated on 19-Mar-2024

Summary

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Gene symbol
PIP5K1B
Gene description
phosphatidylinositol-4-phosphate 5-kinase type 1 beta
See related
EnsemblRapid:ENSPGUG00005010636
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See PIP5K1B in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844028.1 (38244368..38320350)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010706.1 (14993486..15069593, complement)

NW_026844028.1Genomic Context describing neighboring genes Neighboring gene phosphoglucomutase 5 Neighboring gene transmembrane protein 252 Neighboring gene frataxin Neighboring gene tight junction protein 2 Neighboring gene uncharacterized LOC117661464

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol 4-phosphate 5-kinase type-1 beta

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844028.1 Reference CU_Pguttatus_1

    Range
    38244368..38320350
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034410280.1 → XP_034266171.1  phosphatidylinositol 4-phosphate 5-kinase type-1 beta isoform X1

    UniProtKB/TrEMBL
    A0A6P9BCR1
    Conserved Domains (1) summary
    cl28923
    Location:27 → 400
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  2. XM_034410284.2 → XP_034266175.1  phosphatidylinositol 4-phosphate 5-kinase type-1 beta isoform X2

    UniProtKB/TrEMBL
    A0A6P9BDW4
    Related
    ENSPGUP00005015081.1
    Conserved Domains (1) summary
    cl28923
    Location:27 → 400
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  3. XM_034410278.2 → XP_034266169.1  phosphatidylinositol 4-phosphate 5-kinase type-1 beta isoform X1

    UniProtKB/TrEMBL
    A0A6P9BCR1
    Conserved Domains (1) summary
    cl28923
    Location:27 → 400
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  4. XM_034410279.2 → XP_034266170.1  phosphatidylinositol 4-phosphate 5-kinase type-1 beta isoform X1

    UniProtKB/TrEMBL
    A0A6P9BCR1
    Conserved Domains (1) summary
    cl28923
    Location:27 → 400
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  5. XM_034410281.2 → XP_034266172.1  phosphatidylinositol 4-phosphate 5-kinase type-1 beta isoform X1

    UniProtKB/TrEMBL
    A0A6P9BCR1
    Conserved Domains (1) summary
    cl28923
    Location:27 → 400
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  6. XM_034410283.1 → XP_034266174.1  phosphatidylinositol 4-phosphate 5-kinase type-1 beta isoform X1

    UniProtKB/TrEMBL
    A0A6P9BCR1
    Related
    ENSPGUP00005015095.1, ENSPGUT00005015672.1
    Conserved Domains (1) summary
    cl28923
    Location:27 → 400
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  7. XM_034410282.1 → XP_034266173.1  phosphatidylinositol 4-phosphate 5-kinase type-1 beta isoform X1

    UniProtKB/TrEMBL
    A0A6P9BCR1
    Conserved Domains (1) summary
    cl28923
    Location:27 → 400
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family

  8. XM_034410286.2 → XP_034266177.1  phosphatidylinositol 4-phosphate 5-kinase type-1 beta isoform X3

    UniProtKB/TrEMBL
    A0A6P9B4R2
    Related
    ENSPGUP00005015064.1
    Conserved Domains (1) summary
    cl28923
    Location:1 → 347
    PIPKc; Phosphatidylinositol phosphate kinase (PIPK) catalytic domain family
Nucleotide Protein
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