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LOC117656145 phosphatidylinositol-3-phosphatase SAC1 [ Pantherophis guttatus ]

Gene ID: 117656145, updated on 30-Nov-2023

Summary

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Gene symbol
LOC117656145
Gene description
phosphatidylinositol-3-phosphatase SAC1
See related
EnsemblRapid:ENSPGUG00005013975
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Also known as
SACM1L
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Genomic context

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See LOC117656145 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844015.1 (57645967..57703102)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010908.1 (608983..653546)

NW_026844015.1Genomic Context describing neighboring genes Neighboring gene small nuclear ribonucleoprotein Sm D1 Neighboring gene transfer RNA cysteine (anticodon ACA) Neighboring gene LIM domain-containing protein 1-like Neighboring gene leucine--tRNA ligase, mitochondrial-like Neighboring gene uncharacterized LOC132710236

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phosphatidylinositol-4-phosphate phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylinositol dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
phosphatidylinositol-3-phosphatase SAC1
Names
SAC1 like phosphatidylinositide phosphatase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844015.1 Reference CU_Pguttatus_1

    Range
    57645967..57703102
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_060685935.1 → XP_060541918.1  phosphatidylinositol-3-phosphatase SAC1 isoform X2

  2. XM_060685934.1 → XP_060541917.1  phosphatidylinositol-3-phosphatase SAC1 isoform X1

Nucleotide Protein
Heading Accession and Version

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