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LOC117656094 glycerol-3-phosphate dehydrogenase 1-like protein [ Pantherophis guttatus ]

Gene ID: 117656094, updated on 11-Apr-2024

Summary

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Gene symbol
LOC117656094
Gene description
glycerol-3-phosphate dehydrogenase 1-like protein
See related
EnsemblRapid:ENSPGUG00005011988
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Also known as
GPD1L
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Genomic context

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See LOC117656094 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844099.1 (720659..740494)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010907.1 (7455262..7475102, complement)

NW_026844099.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC132709564 Neighboring gene uncharacterized LOC132709562 Neighboring gene CKLF-like MARVEL transmembrane domain-containing protein 8 Neighboring gene CKLF-like MARVEL transmembrane domain-containing protein 7

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables glycerol-3-phosphate dehydrogenase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein homodimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in glycerol-3-phosphate catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of glycerol-3-phosphate dehydrogenase (FAD) complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycerol-3-phosphate dehydrogenase 1-like protein
Names
glycerol-3-phosphate dehydrogenase 1 like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844099.1 Reference CU_Pguttatus_1

    Range
    720659..740494
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034404077.2 → XP_034259968.1  glycerol-3-phosphate dehydrogenase 1-like protein

    UniProtKB/TrEMBL
    A0A6P9ANJ0
    Related
    ENSPGUP00005017050.1
    Conserved Domains (1) summary
    TIGR03376
    Location:9 → 346
    glycerol3P_DH; glycerol-3-phosphate dehydrogenase (NAD(+))
Nucleotide Protein
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