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CHPT1 choline phosphotransferase 1 [ Pantherophis guttatus ]

Gene ID: 117655760, updated on 19-Mar-2024

Summary

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Gene symbol
CHPT1
Gene description
choline phosphotransferase 1
See related
EnsemblRapid:ENSPGUG00005010835
Gene type
protein coding
RefSeq status
MODEL
Organism
Pantherophis guttatus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Lepidosauria; Squamata; Bifurcata; Unidentata; Episquamata; Toxicofera; Serpentes; Colubroidea; Colubridae; Colubrinae; Pantherophis
Orthologs
human mouse all
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Genomic context

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See CHPT1 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_10 current CU_Pguttatus_1 (GCF_029531705.1) Unplaced Scaffold NW_026844064.1 (10587010..10610540)
100 previous assembly UNIGE_PanGut_3.0 (GCF_001185365.1) Unplaced Scaffold NW_023010904.1 (10513929..10537461)

NW_026844064.1Genomic Context describing neighboring genes Neighboring gene Spi-C transcription factor Neighboring gene myosin binding protein C1 Neighboring gene synaptonemal complex protein 3 Neighboring gene N-acetylglucosamine-1-phosphate transferase subunits alpha and beta Neighboring gene DNA damage regulated autophagy modulator 1 Neighboring gene WASH complex subunit 3

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables diacylglycerol cholinephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ethanolaminephosphotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in phosphatidylethanolamine biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cholinephosphotransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_029531705.1-RS_2023_10

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CU_Pguttatus_1

Genomic

  1. NW_026844064.1 Reference CU_Pguttatus_1

    Range
    10587010..10610540
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034403473.2 → XP_034259364.1  cholinephosphotransferase 1

    UniProtKB/TrEMBL
    A0A6P9APM1
    Related
    ENSPGUP00005015347.1
    Conserved Domains (1) summary
    cl00453
    Location:12 → 203
    CDP-OH_P_transf; CDP-alcohol phosphatidyltransferase
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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