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botv exostosin like glycosyltransferase 3 [ Thrips palmi ]

Gene ID: 117650602, updated on 23-May-2024

Summary

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Gene symbol
botv
Gene description
exostosin like glycosyltransferase 3
See related
EnsemblRapid:LOC117650602
Gene type
protein coding
RefSeq status
MODEL
Organism
Thrips palmi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Thysanoptera; Terebrantia; Thripoidea; Thripidae; Thrips
Orthologs
fruit fly all
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Genomic context

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See botv in Genome Data Viewer
Location:
chromosome: Un
Exon count:
18
Annotation release Status Assembly Chr Location
100 current TpBJ-2018v1 (GCF_012932325.1) Unplaced Scaffold NW_023144632.1 (14046801..14052366)

NW_023144632.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117651196 Neighboring gene supervillin Neighboring gene serine/arginine repetitive matrix protein 2-like Neighboring gene myrosinase 1-like Neighboring gene uncharacterized LOC117650932 Neighboring gene juvenile hormone esterase-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023144632 Unplaced Scaffold Reference TpBJ-2018v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Phylogenomics and the evolution of hemipteroid insects. Johnson KP, et al. Proc Natl Acad Sci U S A, 2018 Dec 11. PMID 30478043, Free PMC Article
  2. Phylogenomics resolves the timing and pattern of insect evolution. Misof B, et al. Science, 2014 Nov 7. PMID 25378627

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
exostosin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Thrips palmi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TpBJ-2018v1 Primary Assembly

Genomic

  1. NW_023144632.1 Reference TpBJ-2018v1 Primary Assembly

    Range
    14046801..14052366
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034394140.1 → XP_034250031.1  exostosin-3

    UniProtKB/TrEMBL
    A0A6P8ZXA4
    Related
    XP_034250031.1, XM_034394140.1
    Conserved Domains (3) summary
    COG1196
    Location:61 → 154
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam03016
    Location:200 → 485
    Exostosin; Exostosin family
    pfam09258
    Location:647 → 884
    Glyco_transf_64; Glycosyl transferase family 64 domain

  2. XM_034394138.1 → XP_034250029.1  exostosin-3

    UniProtKB/TrEMBL
    A0A6P8ZXA4
    Related
    XP_034250029.1, XM_034394138.1
    Conserved Domains (3) summary
    COG1196
    Location:61 → 154
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam03016
    Location:200 → 485
    Exostosin; Exostosin family
    pfam09258
    Location:647 → 884
    Glyco_transf_64; Glycosyl transferase family 64 domain

  3. XM_034394141.1 → XP_034250032.1  exostosin-3

    UniProtKB/TrEMBL
    A0A6P8ZXA4
    Related
    XP_034250032.1, XM_034394141.1
    Conserved Domains (3) summary
    COG1196
    Location:61 → 154
    Smc; Chromosome segregation ATPase [Cell cycle control, cell division, chromosome partitioning]
    pfam03016
    Location:200 → 485
    Exostosin; Exostosin family
    pfam09258
    Location:647 → 884
    Glyco_transf_64; Glycosyl transferase family 64 domain
Nucleotide Protein
Heading Accession and Version

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