U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117641177 TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like [ Thrips palmi ]

Gene ID: 117641177, updated on 14-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC117641177
Gene description
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like
See related
EnsemblRapid:LOC117641177
Gene type
protein coding
RefSeq status
MODEL
Organism
Thrips palmi
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Paraneoptera; Thysanoptera; Terebrantia; Thripoidea; Thripidae; Thrips
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117641177 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current TpBJ-2018v1 (GCF_012932325.1) Unplaced Scaffold NW_023144620.1 (12726405..12728973, complement)

NW_023144620.1Genomic Context describing neighboring genes Neighboring gene mucin-5AC-like Neighboring gene extensin-like Neighboring gene uncharacterized LOC117641267 Neighboring gene nardilysin-like Neighboring gene ubiquitin carboxyl-terminal hydrolase 48-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_023144620 Unplaced Scaffold Reference TpBJ-2018v1 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. Phylogenomics and the evolution of hemipteroid insects. Johnson KP, et al. Proc Natl Acad Sci U S A, 2018 Dec 11. PMID 30478043, Free PMC Article
  2. Phylogenomics resolves the timing and pattern of insect evolution. Misof B, et al. Science, 2014 Nov 7. PMID 25378627
  3. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein serine/threonine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Thrips palmi Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference TpBJ-2018v1 Primary Assembly

Genomic

  1. NW_023144620.1 Reference TpBJ-2018v1 Primary Assembly

    Range
    12726405..12728973 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034378356.1 → XP_034234247.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 1-like

    UniProtKB/TrEMBL
    A0A6P8YJX8
    Related
    XP_034234247.1, XM_034378356.1
    Conserved Domains (1) summary
    cd00143
    Location:44 → 351
    PP2Cc; Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence ...
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases