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LOC117636831 arabinosyltransferase RRA2-like [ Prunus dulcis (almond) ]

Gene ID: 117636831, updated on 9-Nov-2023

Summary

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Gene symbol
LOC117636831
Gene description
arabinosyltransferase RRA2-like
Locus tag
ALMOND_2B019257
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus dulcis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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Location:
chromosome: 8
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ALMONDv2 (GCF_902201215.1) 8 NC_047657.1 (10973666..10975772)

Chromosome 8 - NC_047657.1Genomic Context describing neighboring genes Neighboring gene putative pentatricopeptide repeat-containing protein At3g18840 Neighboring gene HVA22-like protein k Neighboring gene G-box-binding factor 1-like Neighboring gene signal recognition particle 19 kDa protein Neighboring gene deSI-like protein At4g17486

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047657.1 Chromosome 8 Reference ALMONDv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in root hair cell development IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
arabinosyltransferase RRA2-like
Names
PREDICTED: arabinosyltransferase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus dulcis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ALMONDv2 Primary Assembly

Genomic

  1. NC_047657.1 Reference ALMONDv2 Primary Assembly

    Range
    10973666..10975772
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034371517.1 → XP_034227408.1  arabinosyltransferase RRA2-like

    UniProtKB/TrEMBL
    A0A5E4EI56
    Conserved Domains (1) summary
    pfam03407
    Location:183 → 405
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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