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LOC117632319 probable glucuronoxylan glucuronosyltransferase IRX7 [ Prunus dulcis (almond) ]

Gene ID: 117632319, updated on 6-Jun-2024

Summary

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Gene symbol
LOC117632319
Gene description
probable glucuronoxylan glucuronosyltransferase IRX7
Locus tag
ALMOND_2B005716
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus dulcis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC117632319 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ALMONDv2 (GCF_902201215.1) 6 NC_047655.1 (8011027..8013608, complement)

Chromosome 6 - NC_047655.1Genomic Context describing neighboring genes Neighboring gene L-lactate dehydrogenase-like Neighboring gene disease resistance protein RPV1-like Neighboring gene protein NUCLEAR FUSION DEFECTIVE 4-like Neighboring gene zinc finger MYM-type protein 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047655.1 Chromosome 6 Reference ALMONDv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable glucuronoxylan glucuronosyltransferase IRX7
Names
PREDICTED: probable

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus dulcis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ALMONDv2 Primary Assembly

Genomic

  1. NC_047655.1 Reference ALMONDv2 Primary Assembly

    Range
    8011027..8013608 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034365761.1 → XP_034221652.1  probable glucuronoxylan glucuronosyltransferase IRX7

    UniProtKB/TrEMBL
    A0A5E4G3Q1, A0AAD4YV31
    Conserved Domains (1) summary
    pfam03016
    Location:108 → 403
    Exostosin; Exostosin family
Nucleotide Protein
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