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LOC117631574 beta-1,6-galactosyltransferase GALT29A-like [ Prunus dulcis (almond) ]

Gene ID: 117631574, updated on 6-Jun-2024

Summary

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Gene symbol
LOC117631574
Gene description
beta-1,6-galactosyltransferase GALT29A-like
Locus tag
ALMOND_2B022916
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus dulcis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC117631574 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ALMONDv2 (GCF_902201215.1) 6 NC_047655.1 (10023870..10025945)

Chromosome 6 - NC_047655.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117629667 Neighboring gene zinc finger A20 and AN1 domain-containing stress-associated protein 3-like Neighboring gene protein ADP-ribosyltransferase PARP3-like Neighboring gene uncharacterized LOC117630252

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047655.1 Chromosome 6 Reference ALMONDv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,6-galactosyltransferase GALT29A-like
Names
PREDICTED: CMP-N-acetylneuraminate-beta-galactosa

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus dulcis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ALMONDv2 Primary Assembly

Genomic

  1. NC_047655.1 Reference ALMONDv2 Primary Assembly

    Range
    10023870..10025945
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034364808.1 → XP_034220699.1  beta-1,6-galactosyltransferase GALT29A-like

    UniProtKB/TrEMBL
    A0A5E4FZI0, A0AAD4VCW1
    Conserved Domains (1) summary
    pfam00777
    Location:170 → 410
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
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