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LOC117631277 glycogen synthase-like [ Prunus dulcis (almond) ]

Gene ID: 117631277, updated on 18-Sep-2024

Summary

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Gene symbol
LOC117631277
Gene description
glycogen synthase-like
Locus tag
ALMOND_2B018174
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus dulcis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC117631277 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
16
Annotation release Status Assembly Chr Location
100 current ALMONDv2 (GCF_902201215.1) 6 NC_047655.1 (11827100..11838574)

Chromosome 6 - NC_047655.1Genomic Context describing neighboring genes Neighboring gene aluminum-activated malate transporter 2 Neighboring gene transcription factor LHW Neighboring gene uncharacterized LOC117630283 Neighboring gene BEL1-like homeodomain protein 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047655.1 Chromosome 6 Reference ALMONDv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,4-glucan glucosyltransferase (UDP-glucose donor) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
glycogen synthase-like
Names
PREDICTED: glycogen

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus dulcis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ALMONDv2 Primary Assembly

Genomic

  1. NC_047655.1 Reference ALMONDv2 Primary Assembly

    Range
    11827100..11838574
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034364328.1 → XP_034220219.1  glycogen synthase-like isoform X1

    UniProtKB/TrEMBL
    A0AAD4VF53
    Conserved Domains (1) summary
    cd03791
    Location:114 → 604
    GT5_Glycogen_synthase_DULL1-like; Glycogen synthase GlgA and similar proteins

  2. XM_034364329.1 → XP_034220220.1  glycogen synthase-like isoform X2

    UniProtKB/TrEMBL
    A0A5E4FIH2, A0AAD4VF53
    Conserved Domains (1) summary
    cd03791
    Location:114 → 603
    GT5_Glycogen_synthase_DULL1-like; Glycogen synthase GlgA and similar proteins

RNA

  1. XR_004586305.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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