U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117630533 lactosylceramide 4-alpha-galactosyltransferase-like [ Prunus dulcis (almond) ]

Gene ID: 117630533, updated on 6-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
LOC117630533
Gene description
lactosylceramide 4-alpha-galactosyltransferase-like
Locus tag
ALMOND_2B025320
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus dulcis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117630533 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
1
Annotation release Status Assembly Chr Location
100 current ALMONDv2 (GCF_902201215.1) 6 NC_047655.1 (24674480..24675790, complement)

Chromosome 6 - NC_047655.1Genomic Context describing neighboring genes Neighboring gene UPF0481 protein At3g47200-like Neighboring gene UPF0481 protein At3g47200-like Neighboring gene 30S ribosomal protein S31, chloroplastic Neighboring gene uncharacterized LOC117633121 Neighboring gene lactosylceramide 4-alpha-galactosyltransferase-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047655.1 Chromosome 6 Reference ALMONDv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

General protein information

Go to the top of the page Help
Preferred Names
lactosylceramide 4-alpha-galactosyltransferase-like
Names
PREDICTED: lactosylceramide

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Prunus dulcis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ALMONDv2 Primary Assembly

Genomic

  1. NC_047655.1 Reference ALMONDv2 Primary Assembly

    Range
    24674480..24675790 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034363241.1 → XP_034219132.1  lactosylceramide 4-alpha-galactosyltransferase-like

    UniProtKB/TrEMBL
    A0A5E4EEU6, A0AAD4VIY9
    Conserved Domains (2) summary
    pfam04488
    Location:165 → 287
    Gly_transf_sug; Glycosyltransferase sugar-binding region containing DXD motif
    pfam04572
    Location:309 → 430
    Gb3_synth; Alpha 1,4-glycosyltransferase conserved region
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases