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LOC117621052 mitochondrial arginine transporter BAC2-like [ Prunus dulcis (almond) ]

Gene ID: 117621052, updated on 6-Jun-2024

Summary

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Gene symbol
LOC117621052
Gene description
mitochondrial arginine transporter BAC2-like
Locus tag
ALMOND_2B006319
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus dulcis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC117621052 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
2
Annotation release Status Assembly Chr Location
100 current ALMONDv2 (GCF_902201215.1) 3 NC_047652.1 (4911884..4913524, complement)

Chromosome 3 - NC_047652.1Genomic Context describing neighboring genes Neighboring gene kinesin-like protein KIN-13B Neighboring gene pyridoxal 5'-phosphate synthase-like subunit PDX1.2 Neighboring gene mitochondrial arginine transporter BAC2-like Neighboring gene phosphatase and actin regulator 4B-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047652.1 Chromosome 3 Reference ALMONDv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial arginine transporter BAC2-like
Names
PREDICTED: mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus dulcis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ALMONDv2 Primary Assembly

Genomic

  1. NC_047652.1 Reference ALMONDv2 Primary Assembly

    Range
    4911884..4913524 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034351312.1 → XP_034207203.1  mitochondrial arginine transporter BAC2-like

    UniProtKB/TrEMBL
    A0A5E4FZ17, A0AAD4W7Q0
    Conserved Domains (1) summary
    pfam00153
    Location:226 → 310
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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