U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117620681 callose synthase 7 [ Prunus dulcis (almond) ]

Gene ID: 117620681, updated on 6-Jun-2024

Summary

Go to the top of the page Help
Gene symbol
LOC117620681
Gene description
callose synthase 7
Locus tag
ALMOND_2B026648
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus dulcis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117620681 in Genome Data Viewer
Location:
chromosome: 3
Exon count:
42
Annotation release Status Assembly Chr Location
100 current ALMONDv2 (GCF_902201215.1) 3 NC_047652.1 (16324358..16341693, complement)

Chromosome 3 - NC_047652.1Genomic Context describing neighboring genes Neighboring gene chlorophyll a-b binding protein, chloroplastic-like Neighboring gene uncharacterized LOC117620597 Neighboring gene uncharacterized LOC117621863 Neighboring gene tobamovirus multiplication protein 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047652.1 Chromosome 3 Reference ALMONDv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1,3-beta-D-glucan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in (1->3)-beta-D-glucan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of 1,3-beta-D-glucan synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
callose synthase 7
Names
PREDICTED: callose synthase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Prunus dulcis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ALMONDv2 Primary Assembly

Genomic

  1. NC_047652.1 Reference ALMONDv2 Primary Assembly

    Range
    16324358..16341693 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034350827.1 → XP_034206718.1  callose synthase 7 isoform X1

    UniProtKB/TrEMBL
    A0AAD4ZBA0
    Conserved Domains (3) summary
    pfam02364
    Location:1042 → 1772
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:52 → 173
    Vta1; Vta1 like
    pfam14288
    Location:331 → 442
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1

  2. XM_034350828.1 → XP_034206719.1  callose synthase 7 isoform X2

    UniProtKB/TrEMBL
    A0A5E4G1G2, A0AAD4ZBA0
    Conserved Domains (3) summary
    pfam02364
    Location:1041 → 1771
    Glucan_synthase; 1,3-beta-glucan synthase component
    pfam04652
    Location:52 → 173
    Vta1; Vta1 like
    pfam14288
    Location:331 → 442
    FKS1_dom1; 1,3-beta-glucan synthase subunit FKS1, domain-1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases