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LOC117620291 UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4 [ Prunus dulcis (almond) ]

Gene ID: 117620291, updated on 6-Jun-2024

Summary

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Gene symbol
LOC117620291
Gene description
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
Locus tag
ALMOND_2B029491
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus dulcis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC117620291 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
4
Annotation release Status Assembly Chr Location
100 current ALMONDv2 (GCF_902201215.1) 2 NC_047651.1 (18030886..18033812)

Chromosome 2 - NC_047651.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117617708 Neighboring gene protein ABIL1 Neighboring gene uncharacterized LOC117618812 Neighboring gene secreted RxLR effector protein 161-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047651.1 Chromosome 2 Reference ALMONDv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables glycosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4
Names
PREDICTED: UDP-D-xylose L-fucose alpha-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus dulcis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ALMONDv2 Primary Assembly

Genomic

  1. NC_047651.1 Reference ALMONDv2 Primary Assembly

    Range
    18030886..18033812
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034350455.1 → XP_034206346.1  UDP-D-xylose:L-fucose alpha-1,3-D-xylosyltransferase MGP4

    UniProtKB/TrEMBL
    A0A5E4F9G3, A0AAD4WLS4
    Conserved Domains (1) summary
    pfam03407
    Location:116 → 335
    Nucleotid_trans; Nucleotide-diphospho-sugar transferase
Nucleotide Protein
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