U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117617461 cellulose synthase-like protein D3 [ Prunus dulcis (almond) ]

Gene ID: 117617461, updated on 9-Nov-2023

Summary

Go to the top of the page Help
Gene symbol
LOC117617461
Gene description
cellulose synthase-like protein D3
Locus tag
ALMOND_2B027070
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus dulcis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117617461 in Genome Data Viewer
Location:
chromosome: 2
Exon count:
5
Annotation release Status Assembly Chr Location
100 current ALMONDv2 (GCF_902201215.1) 2 NC_047651.1 (25923859..25929480, complement)

Chromosome 2 - NC_047651.1Genomic Context describing neighboring genes Neighboring gene transducin beta-like protein 3 Neighboring gene uncharacterized LOC117618474 Neighboring gene probable arabinosyltransferase ARAD1 Neighboring gene TOM1-like protein 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047651.1 Chromosome 2 Reference ALMONDv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cellulose synthase (UDP-forming) activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mannan synthase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cellulose biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in plant-type primary cell wall biogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in trans-Golgi network IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
cellulose synthase-like protein D3
Names
PREDICTED: cellulose synthase

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Prunus dulcis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ALMONDv2 Primary Assembly

Genomic

  1. NC_047651.1 Reference ALMONDv2 Primary Assembly

    Range
    25923859..25929480 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034346840.1 → XP_034202731.1  cellulose synthase-like protein D3

    UniProtKB/TrEMBL
    A0A4Y1R332, A0A5E4E6R8
    Conserved Domains (1) summary
    PLN02248
    Location:1 → 1145
    PLN02248; cellulose synthase-like protein

  2. XM_034346839.1 → XP_034202730.1  cellulose synthase-like protein D3

    UniProtKB/TrEMBL
    A0A4Y1R332, A0A5E4E6R8
    Conserved Domains (1) summary
    PLN02248
    Location:1 → 1145
    PLN02248; cellulose synthase-like protein

  3. XM_034346841.1 → XP_034202732.1  cellulose synthase-like protein D3

    UniProtKB/TrEMBL
    A0A4Y1R332, A0A5E4E6R8
    Conserved Domains (1) summary
    PLN02248
    Location:1 → 1145
    PLN02248; cellulose synthase-like protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases