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LOC117612890 beta-1,3-galactosyltransferase 7 [ Prunus dulcis (almond) ]

Gene ID: 117612890, updated on 6-Jun-2024

Summary

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Gene symbol
LOC117612890
Gene description
beta-1,3-galactosyltransferase 7
Locus tag
ALMOND_2B003133
Gene type
protein coding
RefSeq status
MODEL
Organism
Prunus dulcis
Lineage
Eukaryota; Viridiplantae; Streptophyta; Embryophyta; Tracheophyta; Spermatophyta; Magnoliopsida; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Rosales; Rosaceae; Amygdaloideae; Amygdaleae; Prunus
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Genomic context

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See LOC117612890 in Genome Data Viewer
Location:
chromosome: 1
Exon count:
11
Annotation release Status Assembly Chr Location
100 current ALMONDv2 (GCF_902201215.1) 1 NC_047650.1 (38133527..38137705, complement)

Chromosome 1 - NC_047650.1Genomic Context describing neighboring genes Neighboring gene homeobox protein 10 Neighboring gene vacuolar protein sorting-associated protein 9A-like Neighboring gene uncharacterized LOC117616490 Neighboring gene cytochrome b-c1 complex subunit 9-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047650.1 Chromosome 1 Reference ALMONDv2 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-1,3-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,3-galactosyltransferase 7
Names
PREDICTED: beta-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Prunus dulcis Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference ALMONDv2 Primary Assembly

Genomic

  1. NC_047650.1 Reference ALMONDv2 Primary Assembly

    Range
    38133527..38137705 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034341539.1 → XP_034197430.1  beta-1,3-galactosyltransferase 7 isoform X3

    UniProtKB/TrEMBL
    A0A5E4EDD3, A0AAD4ZWH2
    Conserved Domains (1) summary
    PLN03193
    Location:51 → 447
    PLN03193; beta-1,3-galactosyltransferase; Provisional

  2. XM_034341526.1 → XP_034197417.1  beta-1,3-galactosyltransferase 7 isoform X1

    UniProtKB/TrEMBL
    A0A5E4EDZ7
    Conserved Domains (1) summary
    PLN03193
    Location:5 → 400
    PLN03193; beta-1,3-galactosyltransferase; Provisional

  3. XM_034341534.1 → XP_034197425.1  beta-1,3-galactosyltransferase 7 isoform X2

    UniProtKB/TrEMBL
    A0A5E4EDZ7
    Conserved Domains (1) summary
    PLN03193
    Location:5 → 397
    PLN03193; beta-1,3-galactosyltransferase; Provisional
Nucleotide Protein
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