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Tab2 TAK1-associated binding protein 2 [ Osmia lignaria (orchard mason bee) ]

Gene ID: 117609506, updated on 10-Oct-2024

Summary

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Gene symbol
Tab2
Gene description
TAK1-associated binding protein 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Osmia lignaria
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Megachilidae; Megachilinae; Osmia
Orthologs
fruit fly honey bee all
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Genomic context

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See Tab2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
100 current USDA_OLig_1.0 (GCF_012274295.1) Unplaced Scaffold NW_023009275.1 (20278..29587, complement)

NW_023009275.1Genomic Context describing neighboring genes Neighboring gene putative inorganic phosphate cotransporter Neighboring gene Deterin Neighboring gene serine/threonine-protein kinase/endoribonuclease Ire1 Neighboring gene pre-mRNA-splicing factor SYF2 Neighboring gene chloride intracellular channel protein 5 Neighboring gene glutaredoxin-C4-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023009275 Unplaced Scaffold Reference USDA_OLig_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
TGF-beta-activated kinase 1 and MAP3K7-binding protein 3; ataxin-2 homolog

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Osmia lignaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OLig_1.0

Genomic

  1. NW_023009275.1 Reference USDA_OLig_1.0

    Range
    20278..29587 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034335943.1 → XP_034191834.1  ataxin-2 homolog isoform X3

    Conserved Domains (2) summary
    cd14362
    Location:11 → 59
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR02169
    Location:393 → 468
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type

  2. XM_034335941.1 → XP_034191832.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X1

    Conserved Domains (4) summary
    smart00547
    Location:530 → 553
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:11 → 59
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR02169
    Location:393 → 468
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    sd00029
    Location:531 → 550
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

  3. XM_034335942.1 → XP_034191833.1  TGF-beta-activated kinase 1 and MAP3K7-binding protein 3 isoform X2

    Conserved Domains (4) summary
    smart00547
    Location:523 → 546
    ZnF_RBZ; Zinc finger domain
    cd14362
    Location:11 → 52
    CUE_TAB2_TAB3; CUE domain found in the N-terminal of TGF-beta-activated kinase 1 and MAP3K7-binding proteins TAB2, TAB3 and similar proteins
    TIGR02169
    Location:386 → 461
    SMC_prok_A; chromosome segregation protein SMC, primarily archaeal type
    sd00029
    Location:524 → 543
    zf-RanBP2; RanBP2-type Zn finger [structural motif]

RNA

  1. XR_004582605.1 RNA Sequence

  2. XR_004582607.1 RNA Sequence

  3. XR_004582609.1 RNA Sequence

  4. XR_004582610.1 RNA Sequence

  5. XR_004582606.1 RNA Sequence

  6. XR_004582608.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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