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LOC117609070 dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 [ Osmia lignaria (orchard mason bee) ]

Gene ID: 117609070, updated on 10-May-2024

Summary

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Gene symbol
LOC117609070
Gene description
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11
Gene type
protein coding
RefSeq status
MODEL
Organism
Osmia lignaria
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Megachilidae; Megachilinae; Osmia
Orthologs
fruit fly all
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Genomic context

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See LOC117609070 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
15
Annotation release Status Assembly Chr Location
100 current USDA_OLig_1.0 (GCF_012274295.1) Unplaced Scaffold NW_023009273.1 (244281..376732, complement)

NW_023009273.1Genomic Context describing neighboring genes Neighboring gene GATA zinc finger domain-containing protein 10-like Neighboring gene cytochrome P450 6k1-like Neighboring gene DNA-directed RNA polymerase II subunit Rpb4-like Neighboring gene protein yellow-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023009273 Unplaced Scaffold Reference USDA_OLig_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11; uncharacterized protein LOC117609070

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Osmia lignaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OLig_1.0

Genomic

  1. NW_023009273.1 Reference USDA_OLig_1.0

    Range
    244281..376732 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034334929.1 → XP_034190820.1  uncharacterized protein LOC117609070 isoform X1

    Conserved Domains (1) summary
    pfam00233
    Location:260 → 490
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  2. XM_034334932.1 → XP_034190823.1  uncharacterized protein LOC117609070 isoform X1

    Conserved Domains (1) summary
    pfam00233
    Location:260 → 490
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  3. XM_034334930.1 → XP_034190821.1  uncharacterized protein LOC117609070 isoform X1

    Conserved Domains (1) summary
    pfam00233
    Location:260 → 490
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  4. XM_034334931.1 → XP_034190822.1  uncharacterized protein LOC117609070 isoform X1

    Conserved Domains (1) summary
    pfam00233
    Location:260 → 490
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  5. XM_034334933.1 → XP_034190824.1  uncharacterized protein LOC117609070 isoform X1

    Conserved Domains (1) summary
    pfam00233
    Location:260 → 490
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase

  6. XM_034334934.1 → XP_034190825.1  dual 3',5'-cyclic-AMP and -GMP phosphodiesterase 11 isoform X2

    Conserved Domains (1) summary
    pfam00233
    Location:80 → 310
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
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