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LOC117607380 solute carrier family 2, facilitated glucose transporter member 1-like [ Osmia lignaria (orchard mason bee) ]

Gene ID: 117607380, updated on 1-Oct-2024

Summary

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Gene symbol
LOC117607380
Gene description
solute carrier family 2, facilitated glucose transporter member 1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Osmia lignaria
Lineage
Eukaryota; Metazoa; Ecdysozoa; Arthropoda; Hexapoda; Insecta; Pterygota; Neoptera; Endopterygota; Hymenoptera; Apocrita; Aculeata; Apoidea; Anthophila; Megachilidae; Megachilinae; Osmia
Orthologs
honey bee all
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Genomic context

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See LOC117607380 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
13
Annotation release Status Assembly Chr Location
100 current USDA_OLig_1.0 (GCF_012274295.1) Unplaced Scaffold NW_023009266.1 (1836518..1851891)

NW_023009266.1Genomic Context describing neighboring genes Neighboring gene RNA-binding protein 33-like Neighboring gene GTP-binding protein 10 homolog Neighboring gene Threonyl-carbamoyl synthesis 4 Neighboring gene uncharacterized LOC117607385 Neighboring gene male-specific lethal 1 homolog Neighboring gene actin, clone 403-like Neighboring gene K(lysine) acetyltransferase 2A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_023009266 Unplaced Scaffold Reference USDA_OLig_1.0

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables hexose transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in monosaccharide transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
solute carrier family 2, facilitated glucose transporter member 1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Osmia lignaria Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference USDA_OLig_1.0

Genomic

  1. NW_023009266.1 Reference USDA_OLig_1.0

    Range
    1836518..1851891
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034331014.1 → XP_034186905.1  solute carrier family 2, facilitated glucose transporter member 1-like isoform X1

    Conserved Domains (1) summary
    cl28910
    Location:81 → 518
    MFS; Major Facilitator Superfamily

  2. XM_034331013.1 → XP_034186904.1  solute carrier family 2, facilitated glucose transporter member 1-like isoform X1

    Conserved Domains (1) summary
    cl28910
    Location:81 → 518
    MFS; Major Facilitator Superfamily

  3. XM_034331015.1 → XP_034186906.1  solute carrier family 2, facilitated glucose transporter member 1-like isoform X1

    Conserved Domains (1) summary
    cl28910
    Location:81 → 518
    MFS; Major Facilitator Superfamily

  4. XM_034331016.1 → XP_034186907.1  solute carrier family 2, facilitated glucose transporter member 1-like isoform X2

    Conserved Domains (1) summary
    cl28910
    Location:53 → 490
    MFS; Major Facilitator Superfamily

  5. XM_034331018.1 → XP_034186909.1  solute carrier family 2, facilitated glucose transporter member 1-like isoform X4

    Conserved Domains (1) summary
    cl28910
    Location:25 → 462
    MFS; Major Facilitator Superfamily

  6. XM_034331017.1 → XP_034186908.1  solute carrier family 2, facilitated glucose transporter member 1-like isoform X3

    Conserved Domains (1) summary
    cl28910
    Location:34 → 471
    MFS; Major Facilitator Superfamily
Nucleotide Protein
Heading Accession and Version

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