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LOC117547584 high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A [ Gymnodraco acuticeps ]

Gene ID: 117547584, updated on 19-Mar-2024

Summary

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Gene symbol
LOC117547584
Gene description
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A
See related
EnsemblRapid:ENSGAUG00000010573
Gene type
protein coding
RefSeq status
MODEL
Organism
Gymnodraco acuticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Bathydraconidae; Gymnodraco
Orthologs
zebrafish all
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Genomic context

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See LOC117547584 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
14
Annotation release Status Assembly Chr Location
100 current fGymAcu1.1 (GCF_902827175.1) Unplaced Scaffold NW_022990213.1 (427959..438696, complement)

NW_022990213.1Genomic Context describing neighboring genes Neighboring gene glycerol kinase-like Neighboring gene DEAD (Asp-Glu-Ala-Asp) box polypeptide 18 Neighboring gene uncharacterized LOC117547589 Neighboring gene small nucleolar RNA ACA64 Neighboring gene small nucleolar RNA ACA64 Neighboring gene nucleolar protein interacting with the FHA domain of MKI67

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022990213 Unplaced Scaffold Reference fGymAcu1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3',5'-cyclic-GMP phosphodiesterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cGMP catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cGMP-mediated signaling IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gymnodraco acuticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fGymAcu1.1

Genomic

  1. NW_022990213.1 Reference fGymAcu1.1

    Range
    427959..438696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034218402.1 → XP_034074293.1  high affinity cGMP-specific 3',5'-cyclic phosphodiesterase 9A

    UniProtKB/TrEMBL
    A0A6P8UBR9
    Related
    ENSGAUP00000023233.1, ENSGAUT00000024161.1
    Conserved Domains (1) summary
    pfam00233
    Location:246 → 476
    PDEase_I; 3'5'-cyclic nucleotide phosphodiesterase
Nucleotide Protein
Heading Accession and Version

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