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LOC117547104 E3 ubiquitin-protein ligase CBL-like [ Gymnodraco acuticeps ]

Gene ID: 117547104, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117547104
Gene description
E3 ubiquitin-protein ligase CBL-like
See related
EnsemblRapid:ENSGAUG00000019043
Gene type
protein coding
RefSeq status
MODEL
Organism
Gymnodraco acuticeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Bathydraconidae; Gymnodraco
Annotation information
Annotation category: partial on reference assembly
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current fGymAcu1.1 (GCF_902827175.1) Unplaced Scaffold NW_022990167.1 (20570..46053)

NW_022990167.1Genomic Context describing neighboring genes Neighboring gene alkB homolog 4, lysine demthylase

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022990167 Unplaced Scaffold Reference fGymAcu1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables SH3 domain binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphotyrosine residue binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables receptor tyrosine kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of epidermal growth factor-activated receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane raft IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase CBL-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Gymnodraco acuticeps Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fGymAcu1.1

Genomic

  1. NW_022990167.1 Reference fGymAcu1.1

    Range
    20570..46053
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034217600.1 → XP_034073491.1  E3 ubiquitin-protein ligase CBL-like

    UniProtKB/TrEMBL
    A0A6P8U9H5
    Related
    ENSGAUP00000041888.1, ENSGAUT00000043613.1
    Conserved Domains (5) summary
    cd09920
    Location:236 → 332
    SH2_Cbl-b_TKB; Src homology 2 (SH2) domain found in the Cbl-b TKB domain
    PHA03247
    Location:525 → 718
    PHA03247; large tegument protein UL36; Provisional
    cd16709
    Location:342 → 407
    RING-HC_Cbl-b; RING finger, HC subclass, found in E3 ubiquitin-protein ligase Cbl-b and similar proteins
    pfam02262
    Location:34 → 152
    Cbl_N; CBL proto-oncogene N-terminal domain 1
    pfam02761
    Location:159 → 242
    Cbl_N2; CBL proto-oncogene N-terminus, EF hand-like domain
Nucleotide Protein
Heading Accession and Version

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