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ctbp2a C-terminal binding protein 2a [ Trematomus bernacchii (emerald rockcod) ]

Gene ID: 117499743, updated on 19-Mar-2024

Summary

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Gene symbol
ctbp2a
Gene description
C-terminal binding protein 2a
See related
EnsemblRapid:ENSTBNG00005010420
Gene type
protein coding
RefSeq status
MODEL
Organism
Trematomus bernacchii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Trematomus
Orthologs
zebrafish all
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Genomic context

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See ctbp2a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
16
Annotation release Status Assembly Chr Location
100 current fTreBer1.1 (GCF_902827165.1) Unplaced Scaffold NW_022987828.1 (11103591..11169298)

NW_022987828.1Genomic Context describing neighboring genes Neighboring gene autophagy-related protein 16-1 Neighboring gene testis expressed 36 Neighboring gene zinc finger, RAN-binding domain containing 1b Neighboring gene abraxas 2, BRISC complex subunit Neighboring gene EEF1A lysine methyltransferase 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022987828 Unplaced Scaffold Reference fTreBer1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
C-terminal-binding protein 2a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trematomus bernacchii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTreBer1.1

Genomic

  1. NW_022987828.1 Reference fTreBer1.1

    Range
    11103591..11169298
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034152337.1 → XP_034008228.1  C-terminal-binding protein 2a isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:367 → 441
    PHA03247; large tegument protein UL36; Provisional
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  2. XM_034152336.1 → XP_034008227.1  C-terminal-binding protein 2a isoform X1

    Related
    ENSTBNP00005021809.1, ENSTBNT00005022751.1
    Conserved Domains (2) summary
    PHA03247
    Location:367 → 441
    PHA03247; large tegument protein UL36; Provisional
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  3. XM_034152343.1 → XP_034008234.1  C-terminal-binding protein 2a isoform X4

    Conserved Domains (1) summary
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  4. XM_034152340.1 → XP_034008231.1  C-terminal-binding protein 2a isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:367 → 441
    PHA03247; large tegument protein UL36; Provisional
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  5. XM_034152338.1 → XP_034008229.1  C-terminal-binding protein 2a isoform X1

    Conserved Domains (2) summary
    PHA03247
    Location:367 → 441
    PHA03247; large tegument protein UL36; Provisional
    cd05299
    Location:34 → 352
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  6. XM_034152342.1 → XP_034008233.1  C-terminal-binding protein 2a isoform X3

    Related
    ENSTBNP00005021984.1, ENSTBNT00005022928.1
    Conserved Domains (2) summary
    PHA03247
    Location:347 → 416
    PHA03247; large tegument protein UL36; Provisional
    cd05299
    Location:9 → 327
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor

  7. XM_034152341.1 → XP_034008232.1  C-terminal-binding protein 2a isoform X2

    Related
    ENSTBNP00005021959.1, ENSTBNT00005022903.1
    Conserved Domains (2) summary
    PHA03247
    Location:360 → 429
    PHA03247; large tegument protein UL36; Provisional
    cd05299
    Location:22 → 340
    CtBP_dh; C-terminal binding protein (CtBP), D-isomer-specific 2-hydroxyacid dehydrogenases related repressor
Nucleotide Protein
Heading Accession and Version

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