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mmadhca metabolism of cobalamin associated Da [ Trematomus bernacchii (emerald rockcod) ]

Gene ID: 117499244, updated on 19-Mar-2024

Summary

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Gene symbol
mmadhca
Gene description
metabolism of cobalamin associated Da
See related
EnsemblRapid:ENSTBNG00005017447
Gene type
protein coding
RefSeq status
MODEL
Organism
Trematomus bernacchii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Trematomus
Orthologs
zebrafish all
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Genomic context

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See mmadhca in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fTreBer1.1 (GCF_902827165.1) Unplaced Scaffold NW_022987821.1 (7450098..7454730)

NW_022987821.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117499078 Neighboring gene Rho family GTPase 3a Neighboring gene rho GTPase-activating protein 20-like Neighboring gene uncharacterized LOC117499101

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022987821 Unplaced Scaffold Reference fTreBer1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cobalamin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
metabolism of cobalamin associated Da

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trematomus bernacchii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTreBer1.1

Genomic

  1. NW_022987821.1 Reference fTreBer1.1

    Range
    7450098..7454730
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034151625.1 → XP_034007516.1  metabolism of cobalamin associated Da

    Related
    ENSTBNP00005038920.1, ENSTBNT00005040310.1
    Conserved Domains (1) summary
    pfam10229
    Location:27 → 292
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein

  2. XM_034151626.1 → XP_034007517.1  metabolism of cobalamin associated Da

    Conserved Domains (1) summary
    pfam10229
    Location:27 → 292
    MMADHC; Methylmalonic aciduria and homocystinuria type D protein
Nucleotide Protein
Heading Accession and Version

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