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pnpla4 patatin-like phospholipase domain containing 4 [ Trematomus bernacchii (emerald rockcod) ]

Gene ID: 117498904, updated on 18-Sep-2024

Summary

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Gene symbol
pnpla4
Gene description
patatin-like phospholipase domain containing 4
See related
EnsemblRapid:ENSTBNG00005026100
Gene type
protein coding
RefSeq status
MODEL
Organism
Trematomus bernacchii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Trematomus
Orthologs
human zebrafish all
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Genomic context

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See pnpla4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
100 current fTreBer1.1 (GCF_902827165.1) Unplaced Scaffold NW_022987821.1 (3186018..3189990, complement)

NW_022987821.1Genomic Context describing neighboring genes Neighboring gene neuroligin 4 X-linked a Neighboring gene steroid sulfatase (microsomal), isozyme S Neighboring gene pseudouridine 5'-phosphatase Neighboring gene anosmin 1a

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022987821 Unplaced Scaffold Reference fTreBer1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables retinyl-palmitate esterase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables triacylglycerol lipase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in lipid homeostasis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in triglyceride catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lipid droplet IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
patatin-like phospholipase domain-containing protein 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trematomus bernacchii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTreBer1.1

Genomic

  1. NW_022987821.1 Reference fTreBer1.1

    Range
    3186018..3189990 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034151072.1 → XP_034006963.1  patatin-like phospholipase domain-containing protein 4 isoform X1

    Related
    ENSTBNP00005061693.1, ENSTBNT00005063672.1
    Conserved Domains (1) summary
    cd07222
    Location:5 → 246
    Pat_PNPLA4; Patatin-like phospholipase domain containing protein 4

  2. XM_034151073.1 → XP_034006964.1  patatin-like phospholipase domain-containing protein 4 isoform X2

    Conserved Domains (1) summary
    cl11396
    Location:1 → 195
    Patatin_and_cPLA2; Patatins and Phospholipases
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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