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LOC117495202 torsin-1A-interacting protein 2-like [ Trematomus bernacchii (emerald rockcod) ]

Gene ID: 117495202, updated on 14-Dec-2023

Summary

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Gene symbol
LOC117495202
Gene description
torsin-1A-interacting protein 2-like
See related
EnsemblRapid:ENSTBNG00005018143
Gene type
protein coding
RefSeq status
MODEL
Organism
Trematomus bernacchii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Trematomus
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Genomic context

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See LOC117495202 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
100 current fTreBer1.1 (GCF_902827165.1) Unplaced Scaffold NW_022987739.1 (2730689..2737087, complement)

NW_022987739.1Genomic Context describing neighboring genes Neighboring gene activating transcription factor 6 Neighboring gene olfactomedin-like 2Ba Neighboring gene torsin-1A-interacting protein 2 Neighboring gene location of vulva defective 1-like Neighboring gene uncharacterized LOC117495233

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022987739 Unplaced Scaffold Reference fTreBer1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in membrane organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
torsin-1A-interacting protein 2-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trematomus bernacchii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTreBer1.1

Genomic

  1. NW_022987739.1 Reference fTreBer1.1

    Range
    2730689..2737087 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034146343.1 → XP_034002234.1  torsin-1A-interacting protein 2-like isoform X2

    Conserved Domains (1) summary
    pfam05609
    Location:46 → 499
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)

  2. XM_034146342.1 → XP_034002233.1  torsin-1A-interacting protein 2-like isoform X1

    Related
    ENSTBNP00005040802.1, ENSTBNT00005042227.1
    Conserved Domains (1) summary
    pfam05609
    Location:47 → 500
    LAP1C; Lamina-associated polypeptide 1C (LAP1C)
Nucleotide Protein
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