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washc4 WASH complex subunit 4 [ Trematomus bernacchii (emerald rockcod) ]

Gene ID: 117491425, updated on 19-Mar-2024

Summary

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Gene symbol
washc4
Gene description
WASH complex subunit 4
See related
EnsemblRapid:ENSTBNG00005011496
Gene type
protein coding
RefSeq status
MODEL
Organism
Trematomus bernacchii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Trematomus
Orthologs
human zebrafish all
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Genomic context

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See washc4 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
33
Annotation release Status Assembly Chr Location
100 current fTreBer1.1 (GCF_902827165.1) Unplaced Scaffold NW_022987714.1 (10097801..10113756, complement)

NW_022987714.1Genomic Context describing neighboring genes Neighboring gene leucine rich repeat containing 10 Neighboring gene CCR4-NOT transcription complex, subunit 2 Neighboring gene solute carrier family 41 member 2a Neighboring gene uncharacterized LOC117491721

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022987714 Unplaced Scaffold Reference fTreBer1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
WASH complex subunit 4

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trematomus bernacchii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTreBer1.1

Genomic

  1. NW_022987714.1 Reference fTreBer1.1

    Range
    10097801..10113756 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034141397.1 → XP_033997288.1  WASH complex subunit 4 isoform X2

    Related
    ENSTBNP00005024259.1, ENSTBNT00005025277.1
    Conserved Domains (3) summary
    pfam14744
    Location:605 → 949
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:33 → 598
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:966 → 1135
    WASH-7_C; WASH complex subunit 7, C-terminal

  2. XM_034141396.1 → XP_033997287.1  WASH complex subunit 4 isoform X1

    Conserved Domains (3) summary
    pfam14744
    Location:605 → 949
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:33 → 598
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:966 → 1135
    WASH-7_C; WASH complex subunit 7, C-terminal
Nucleotide Protein
Heading Accession and Version

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