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slc25a20 solute carrier family 25 member 20 [ Trematomus bernacchii (emerald rockcod) ]

Gene ID: 117489999, updated on 19-Mar-2024

Summary

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Gene symbol
slc25a20
Gene description
solute carrier family 25 member 20
See related
EnsemblRapid:ENSTBNG00005024185
Gene type
protein coding
RefSeq status
MODEL
Organism
Trematomus bernacchii
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Nototheniidae; Trematomus
Orthologs
human zebrafish all
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Genomic context

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See slc25a20 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
100 current fTreBer1.1 (GCF_902827165.1) Unplaced Scaffold NW_022987698.1 (3757515..3764793)

NW_022987698.1Genomic Context describing neighboring genes Neighboring gene NADH:ubiquinone oxidoreductase complex assembly factor Neighboring gene NCK-interacting protein with SH3 domain-like Neighboring gene protein kinase, cAMP-dependent, regulatory, type II, alpha, B Neighboring gene msx2-interacting protein

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_022987698 Unplaced Scaffold Reference fTreBer1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acyl carnitine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carnitine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitochondrial transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrial envelope IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial carnitine/acylcarnitine carrier protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Trematomus bernacchii Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fTreBer1.1

Genomic

  1. NW_022987698.1 Reference fTreBer1.1

    Range
    3757515..3764793
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034139614.1 → XP_033995505.1  mitochondrial carnitine/acylcarnitine carrier protein

    Related
    ENSTBNP00005056094.1, ENSTBNT00005057996.1
    Conserved Domains (1) summary
    pfam00153
    Location:109 → 199
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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