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dnajb6a DnaJ heat shock protein family (Hsp40) member B6a [ Pseudochaenichthys georgianus (South Georgia icefish) ]

Gene ID: 117463013, updated on 19-Mar-2024

Summary

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Gene symbol
dnajb6a
Gene description
DnaJ heat shock protein family (Hsp40) member B6a
See related
EnsemblRapid:ENSPGEG00000007866
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudochaenichthys georgianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Channichthyidae; Pseudochaenichthys
Orthologs
zebrafish all
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Genomic context

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See dnajb6a in Genome Data Viewer
Location:
chromosome: 17
Exon count:
8
Annotation release Status Assembly Chr Location
100 current fPseGeo1.1 (GCF_902827115.1) 17 NC_047519.1 (3927164..3941377, complement)

Chromosome 17 - NC_047519.1Genomic Context describing neighboring genes Neighboring gene E3 ubiquitin-protein ligase RNF31 Neighboring gene chromodomain-helicase-DNA-binding protein 8-like Neighboring gene potassium voltage-gated channel subfamily B member 2-like Neighboring gene XK related 4 Neighboring gene transmembrane protein 68

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047519.1 Chromosome 17 Reference fPseGeo1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATPase activator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables Hsp70 protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables unfolded protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chaperone-mediated protein folding IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein refolding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dnaJ homolog subfamily B member 6a

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudochaenichthys georgianus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPseGeo1.1

Genomic

  1. NC_047519.1 Reference fPseGeo1.1

    Range
    3927164..3941377 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034105419.1 → XP_033961310.1  dnaJ homolog subfamily B member 6a

    Related
    ENSPGEP00000016473.1, ENSPGET00000017211.1
    Conserved Domains (1) summary
    PRK10767
    Location:4 → 110
    PRK10767; chaperone protein DnaJ; Provisional
Nucleotide Protein
Heading Accession and Version

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