U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

washc4 WASH complex subunit 4 [ Pseudochaenichthys georgianus (South Georgia icefish) ]

Gene ID: 117448223, updated on 19-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
washc4
Gene description
WASH complex subunit 4
See related
EnsemblRapid:ENSPGEG00000006688
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudochaenichthys georgianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Channichthyidae; Pseudochaenichthys
Orthologs
human zebrafish all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See washc4 in Genome Data Viewer
Location:
chromosome: 6
Exon count:
33
Annotation release Status Assembly Chr Location
100 current fPseGeo1.1 (GCF_902827115.1) 6 NC_047508.1 (18559094..18575609)

Chromosome 6 - NC_047508.1Genomic Context describing neighboring genes Neighboring gene uncharacterized si:ch211-106e7.2 Neighboring gene solute carrier family 41 member 2a Neighboring gene CCR4-NOT transcription complex subunit 2-like Neighboring gene CCR4-NOT transcription complex subunit 2-like

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NC_047508.1 Chromosome 6 Reference fPseGeo1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endosomal transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endosome organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of WASH complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
WASH complex subunit 4

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Pseudochaenichthys georgianus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPseGeo1.1

Genomic

  1. NC_047508.1 Reference fPseGeo1.1

    Range
    18559094..18575609
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034085414.1 → XP_033941305.1  WASH complex subunit 4 isoform X1

    Related
    ENSPGEP00000013737.1, ENSPGET00000014376.1
    Conserved Domains (3) summary
    pfam14744
    Location:605 → 949
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:33 → 598
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:966 → 1135
    WASH-7_C; WASH complex subunit 7, C-terminal

  2. XM_034085415.1 → XP_033941306.1  WASH complex subunit 4 isoform X2

    Conserved Domains (3) summary
    pfam14744
    Location:605 → 949
    WASH-7_mid; WASH complex subunit 7
    pfam14745
    Location:33 → 598
    WASH-7_N; WASH complex subunit 7, N-terminal
    pfam14746
    Location:966 → 1135
    WASH-7_C; WASH complex subunit 7, C-terminal
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.