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cisha cytokine inducible SH2-containing protein a [ Pseudochaenichthys georgianus (South Georgia icefish) ]

Gene ID: 117446323, updated on 12-Sep-2024

Summary

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Gene symbol
cisha
Gene description
cytokine inducible SH2-containing protein a
See related
EnsemblRapid:ENSPGEG00000005336
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudochaenichthys georgianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Channichthyidae; Pseudochaenichthys
Also known as
cish
Orthologs
zebrafish all
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Genomic context

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See cisha in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
100 current fPseGeo1.1 (GCF_902827115.1) 5 NC_047507.1 (16806940..16811065)

Chromosome 5 - NC_047507.1Genomic Context describing neighboring genes Neighboring gene WD repeat domain 82 Neighboring gene twinfilin-2 Neighboring gene HemK methyltransferase family member 1 Neighboring gene NPR2 like, GATOR1 complex subunit Neighboring gene zinc finger, MYND-type containing 10

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047507.1 Chromosome 5 Reference fPseGeo1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 1-phosphatidylinositol-3-kinase regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in phosphatidylinositol phosphate biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of phosphatidylinositol 3-kinase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytokine-inducible SH2-containing protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudochaenichthys georgianus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPseGeo1.1

Genomic

  1. NC_047507.1 Reference fPseGeo1.1

    Range
    16806940..16811065
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034082482.1 → XP_033938373.1  cytokine-inducible SH2-containing protein isoform X1

    Related
    ENSPGEP00000011091.1, ENSPGET00000011622.1
    Conserved Domains (2) summary
    smart00969
    Location:188 → 221
    SOCS_box; The SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases
    cd10718
    Location:57 → 144
    SH2_CIS; Src homology 2 (SH2) domain found in cytokine-inducible SH2-containing protein (CIS)

  2. XM_034082483.1 → XP_033938374.1  cytokine-inducible SH2-containing protein isoform X2

    Conserved Domains (2) summary
    smart00969
    Location:165 → 198
    SOCS_box; The SOCS box acts as a bridge between specific substrate- binding domains and more generic proteins that comprise a large family of E3 ubiquitin protein ligases
    cd10718
    Location:34 → 121
    SH2_CIS; Src homology 2 (SH2) domain found in cytokine-inducible SH2-containing protein (CIS)
Nucleotide Protein
Heading Accession and Version

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