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LOC117440164 solute carrier family 25 member 29 [ Pseudochaenichthys georgianus (South Georgia icefish) ]

Gene ID: 117440164, updated on 25-Sep-2024

Summary

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Gene symbol
LOC117440164
Gene description
solute carrier family 25 member 29
See related
EnsemblRapid:ENSPGEG00000003501
Gene type
protein coding
RefSeq status
MODEL
Organism
Pseudochaenichthys georgianus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Eupercaria; Perciformes; Notothenioidei; Channichthyidae; Pseudochaenichthys
Also known as
slc25a29
Orthologs
human zebrafish all
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Genomic context

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See LOC117440164 in Genome Data Viewer
Location:
chromosome: 24
Exon count:
4
Annotation release Status Assembly Chr Location
100 current fPseGeo1.1 (GCF_902827115.1) 24 NC_047526.1 (16864247..16870365)

Chromosome 24 - NC_047526.1Genomic Context describing neighboring genes Neighboring gene E3 SUMO-protein ligase KIAA1586-like Neighboring gene solute carrier family 25 member 47a Neighboring gene vertebrae development associated Neighboring gene synapse differentiation inducing 1-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NC_047526.1 Chromosome 24 Reference fPseGeo1.1

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables high-affinity L-arginine transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial L-ornithine transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mitochondrial basic amino acids transporter

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Pseudochaenichthys georgianus Annotation Release 100 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fPseGeo1.1

Genomic

  1. NC_047526.1 Reference fPseGeo1.1

    Range
    16864247..16870365
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034076448.1 → XP_033932339.1  mitochondrial basic amino acids transporter isoform X1

    Related
    ENSPGEP00000007657.1, ENSPGET00000008030.1
    Conserved Domains (1) summary
    pfam00153
    Location:191 → 270
    Mito_carr; Mitochondrial carrier protein

  2. XM_034076449.1 → XP_033932340.1  mitochondrial basic amino acids transporter isoform X2

    Conserved Domains (1) summary
    pfam00153
    Location:128 → 207
    Mito_carr; Mitochondrial carrier protein
Nucleotide Protein
Heading Accession and Version

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