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LOC117432061 beta-catenin-interacting protein 1 [ Acipenser ruthenus (sterlet) ]

Gene ID: 117432061, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117432061
Gene description
beta-catenin-interacting protein 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117432061 in Genome Data Viewer
Location:
chromosome: 27
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 27 NC_081215.1 (3460837..3489669)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 23 NC_048345.1 (3539755..3568272)

Chromosome 27 - NC_081215.1Genomic Context describing neighboring genes Neighboring gene nicotinamide/nicotinic acid mononucleotide adenylyltransferase 1-like Neighboring gene protein LZIC Neighboring gene calsyntenin-1 Neighboring gene phosphatidylinositol 4,5-bisphosphate 3-kinase catalytic subunit Neighboring gene transmembrane protein 201-like Neighboring gene forkhead box protein L2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables beta-catenin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of beta-catenin destruction complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-catenin-interacting protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081215.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    3460837..3489669
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034053489.3 → XP_033909380.1  beta-catenin-interacting protein 1

    Conserved Domains (1) summary
    pfam06384
    Location:1 → 79
    ICAT; Beta-catenin-interacting protein ICAT

  2. XM_034053488.3 → XP_033909379.1  beta-catenin-interacting protein 1

    Conserved Domains (1) summary
    pfam06384
    Location:1 → 79
    ICAT; Beta-catenin-interacting protein ICAT
Nucleotide Protein
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