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LOC117431393 peroxisome proliferator-activated receptor delta-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117431393, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117431393
Gene description
peroxisome proliferator-activated receptor delta-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117431393 in Genome Data Viewer
Location:
chromosome: 30
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 30 NC_081218.1 (13498375..13512950, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 37 NC_048359.1 (2209857..2223614)

Chromosome 30 - NC_081218.1Genomic Context describing neighboring genes Neighboring gene Fanconi anemia group E protein-like Neighboring gene probable E3 ubiquitin-protein ligase makorin-1 Neighboring gene differentially expressed in FDCP 6 homolog Neighboring gene proton-transporting V-type ATPase complex assembly regulator TMEM9-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables nuclear receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in hormone-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of inflammatory response IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of lipid metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
peroxisome proliferator-activated receptor delta-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081218.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    13498375..13512950 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034052266.3 → XP_033908157.3  peroxisome proliferator-activated receptor delta-like

Nucleotide Protein
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