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LOC117431368 beta-1,4-galactosyltransferase 7-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117431368, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117431368
Gene description
beta-1,4-galactosyltransferase 7-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117431368 in Genome Data Viewer
Location:
chromosome: 22
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 22 NC_081210.1 (30200696..30206622, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 15 NC_048337.1 (33419984..33425496, complement)

Chromosome 22 - NC_081210.1Genomic Context describing neighboring genes Neighboring gene homeobox protein EMX1-like Neighboring gene homeobox protein not2-like Neighboring gene transmembrane emp24 domain-containing protein 9-like Neighboring gene vesicular integral-membrane protein VIP36-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables xylosylprotein 4-beta-galactosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in carbohydrate metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteoglycan biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
beta-1,4-galactosyltransferase 7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081210.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    30200696..30206622 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034052226.3 → XP_033908117.3  beta-1,4-galactosyltransferase 7-like

RNA

  1. XR_004548675.3 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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