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LOC117431356 dolichol-phosphate mannosyltransferase subunit 1 [ Acipenser ruthenus (sterlet) ]

Gene ID: 117431356, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117431356
Gene description
dolichol-phosphate mannosyltransferase subunit 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117431356 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 18 NC_081206.1 (9379412..9387910)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 24 NC_048346.1 (17630586..17638854, complement)

Chromosome 18 - NC_081206.1Genomic Context describing neighboring genes Neighboring gene nuclear factor of activated T-cells, cytoplasmic 2 Neighboring gene potassium voltage-gated channel subfamily G member 1-like Neighboring gene activity-dependent neuroprotector homeobox protein-like Neighboring gene biogenesis of lysosome-related organelles complex 1 subunit 4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables dolichyl-phosphate beta-D-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dolichol metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
dolichol-phosphate mannosyltransferase subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081206.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    9379412..9387910
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058991168.1 → XP_058847151.1  dolichol-phosphate mannosyltransferase subunit 1

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases