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LOC117428146 GPI mannosyltransferase 3 [ Acipenser ruthenus (sterlet) ]

Gene ID: 117428146, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117428146
Gene description
GPI mannosyltransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117428146 in Genome Data Viewer
Location:
chromosome: 21
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 21 NC_081209.1 (24458543..24465115)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 27 NC_048349.1 (19846696..19853210, complement)

Chromosome 21 - NC_081209.1Genomic Context describing neighboring genes Neighboring gene ras-related protein Rab-27A Neighboring gene uncharacterized LOC117427645 Neighboring gene cell cycle progression protein 1 Neighboring gene dynein axonemal assembly factor 4-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables alpha-1,2-mannosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in GPI anchor biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
GPI mannosyltransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081209.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    24458543..24465115
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058995172.1 → XP_058851155.1  GPI mannosyltransferase 3

Nucleotide Protein
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