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LOC117426251 E3 ubiquitin/ISG15 ligase TRIM25-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117426251, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117426251
Gene description
E3 ubiquitin/ISG15 ligase TRIM25-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117426251 in Genome Data Viewer
Location:
chromosome: 29
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 29 NC_081217.1 (20836996..20839662, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 28 NC_048350.1 (19568821..19570666, complement)

Chromosome 29 - NC_081217.1Genomic Context describing neighboring genes Neighboring gene FYVE, RhoGEF and PH domain-containing protein 2-like Neighboring gene mitochondrial carrier homolog 1-like Neighboring gene BTB/POZ domain-containing protein KCTD20-like Neighboring gene serine/threonine-protein kinase 38 Neighboring gene E3 ubiquitin/ISG15 ligase TRIM25-like Neighboring gene choline/ethanolaminephosphotransferase 1 Neighboring gene synaptonemal complex protein 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin/ISG15 ligase TRIM25-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081217.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    20836996..20839662 complement
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    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034907834.2 → XP_034763725.2  E3 ubiquitin/ISG15 ligase TRIM25-like

Nucleotide Protein
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