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LOC117426168 E3 ubiquitin-protein ligase znrf3-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117426168, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117426168
Gene description
E3 ubiquitin-protein ligase znrf3-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117426168 in Genome Data Viewer
Location:
chromosome: 11
Exon count:
9
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 11 NC_081199.1 (211801..282303)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 12 NC_048334.1 (161687..230928)

Chromosome 11 - NC_081199.1Genomic Context describing neighboring genes Neighboring gene coiled-coil domain-containing protein 60-like Neighboring gene X-box-binding protein 1-like Neighboring gene kremen protein 1-like Neighboring gene uncharacterized LOC131739344 Neighboring gene sushi domain-containing protein 2-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables frizzled binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in Wnt receptor catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of canonical Wnt signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase znrf3-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081199.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    211801..282303
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034924950.2 → XP_034780841.1  E3 ubiquitin-protein ligase znrf3-like

    Conserved Domains (2) summary
    pfam18212
    Location:78 → 183
    ZNRF_3_ecto; ZNRF-3 Ectodomain
    cl17238
    Location:268 → 312
    RING_Ubox; The superfamily of RING finger (Really Interesting New Gene) domain and U-box domain
Nucleotide Protein
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