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LOC117424743 heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117424743, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117424743
Gene description
heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117424743 in Genome Data Viewer
Location:
chromosome: 19
Exon count:
2
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 19 NC_081207.1 (9454424..9478969)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 17 NC_048339.1 (24043919..24067093, complement)

Chromosome 19 - NC_081207.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131698747 Neighboring gene germ cell-specific gene 1-like protein Neighboring gene dehydrogenase/reductase SDR family member 7C-like Neighboring gene splicing factor U2AF 65 kDa subunit-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables [heparan sulfate]-glucosamine 3-sulfotransferase 1 activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081207.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    9454424..9478969
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034041419.3 → XP_033897310.1  heparan sulfate glucosamine 3-O-sulfotransferase 3B1-like

    Conserved Domains (1) summary
    pfam00685
    Location:111 → 349
    Sulfotransfer_1; Sulfotransferase domain
Nucleotide Protein
Heading Accession and Version

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