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LOC117424516 E3 ubiquitin-protein ligase RNF135-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117424516, updated on 6-Jun-2024

Summary

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Gene symbol
LOC117424516
Gene description
E3 ubiquitin-protein ligase RNF135-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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Location:
chromosome: 19
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 19 NC_081207.1 (1472762..1478765, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 17 NC_048339.1 (32240513..32245060)

Chromosome 19 - NC_081207.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC117424437 Neighboring gene mitochondrial Rho GTPase 1-like Neighboring gene arf-GAP with dual PH domain-containing protein 2-like Neighboring gene ATPase family AAA domain-containing protein 5-like Neighboring gene transcription elongation factor, mitochondrial

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF135-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081207.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    1472762..1478765 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058992295.1 → XP_058848278.1  E3 ubiquitin-protein ligase RNF135-like

    UniProtKB/TrEMBL
    A0A662YWL4

  2. XM_034040907.3 → XP_033896798.3  E3 ubiquitin-protein ligase RNF135-like

    UniProtKB/TrEMBL
    A0A662YWL4
Nucleotide Protein
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