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LOC117423498 voltage-dependent calcium channel gamma-1 subunit-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117423498, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117423498
Gene description
voltage-dependent calcium channel gamma-1 subunit-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117423498 in Genome Data Viewer
Location:
chromosome: 17
Exon count:
4
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 17 NC_081205.1 (760937..772204, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 18 NC_048340.1 (751603..761493, complement)

Chromosome 17 - NC_081205.1Genomic Context describing neighboring genes Neighboring gene 26S proteasome non-ATPase regulatory subunit 12-like Neighboring gene probable helicase with zinc finger domain Neighboring gene voltage-dependent calcium channel gamma-4 subunit-like Neighboring gene voltage-dependent calcium channel gamma-5 subunit

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium channel regulator activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables voltage-gated calcium channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in calcium ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of calcium ion transmembrane transport via high voltage-gated calcium channel IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of L-type voltage-gated calcium channel complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
voltage-dependent calcium channel gamma-1 subunit-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081205.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    760937..772204 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034039383.3 → XP_033895274.1  voltage-dependent calcium channel gamma-1 subunit-like

    Conserved Domains (1) summary
    pfam13903
    Location:16 → 204
    Claudin_2; PMP-22/EMP/MP20/Claudin tight junction
Nucleotide Protein
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