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LOC117423432 ribosomal protein S6 kinase alpha-5-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117423432, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117423432
Gene description
ribosomal protein S6 kinase alpha-5-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117423432 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 18 NC_081206.1 (21327166..21366313, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 24 NC_048346.1 (11659914..11699238)

Chromosome 18 - NC_081206.1Genomic Context describing neighboring genes Neighboring gene thyroid transcription factor 1-like Neighboring gene MAP3K12-binding inhibitory protein 1-like Neighboring gene D-glutamate cyclase, mitochondrial-like Neighboring gene D-glutamate cyclase, mitochondrial-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. Manual GO annotation of predictive protein signatures: the InterPro approach to GO curation. Burge S, et al. Database (Oxford), 2012. PMID 22301074, Free PMC Article
  2. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables magnesium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in intracellular signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of DNA-templated transcription IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
LOW QUALITY PROTEIN: ribosomal protein S6 kinase alpha-5-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081206.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    21327166..21366313 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034039215.3 → XP_033895106.3  LOW QUALITY PROTEIN: ribosomal protein S6 kinase alpha-5-like

Nucleotide Protein
Heading Accession and Version

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