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LOC117422031 placenta growth factor-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117422031, updated on 26-Oct-2023

Summary

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Gene symbol
LOC117422031
Gene description
placenta growth factor-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117422031 in Genome Data Viewer
Location:
chromosome: 15
Exon count:
7
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 15 NC_081203.1 (33261280..33282820)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 16 NC_048338.1 (31973963..31994250)

Chromosome 15 - NC_081203.1Genomic Context describing neighboring genes Neighboring gene transcription factor IIIB 90 kDa subunit-like Neighboring gene BTB/POZ domain-containing protein 6-B Neighboring gene protein phosphatase 1 regulatory subunit 36-like Neighboring gene CLOCK-interacting pacemaker-like Neighboring gene palmitoyltransferase ZDHHC22-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables chemoattractant activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables growth factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables vascular endothelial growth factor receptor binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in induction of positive chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of endothelial cell proliferation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of mast cell chemotaxis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in response to hypoxia IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in sprouting angiogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vascular endothelial growth factor receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in vascular endothelial growth factor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
placenta growth factor-like; vascular endothelial growth factor A-like

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081203.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    33261280..33282820
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034036637.3 → XP_033892528.3  placenta growth factor-like isoform X3

  2. XM_058988013.1 → XP_058843996.1  vascular endothelial growth factor A-like isoform X2

  3. XM_058988012.1 → XP_058843995.1  vascular endothelial growth factor A-like isoform X1

Nucleotide Protein
Heading Accession and Version

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Molecular Biology Databases