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rxylt1 ribitol xylosyltransferase 1 [ Acipenser ruthenus (sterlet) ]

Gene ID: 117419593, updated on 19-Mar-2024

Summary

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Gene symbol
rxylt1
Gene description
ribitol xylosyltransferase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
Orthologs
human zebrafish all
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Genomic context

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See rxylt1 in Genome Data Viewer
Location:
chromosome: 14
Exon count:
6
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 14 NC_081202.1 (8048900..8061545, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 14 NC_048336.1 (29493552..29505056)

Chromosome 14 - NC_081202.1Genomic Context describing neighboring genes Neighboring gene KICSTOR subunit 2-like Neighboring gene SLIT-ROBO Rho GTPase-activating protein 1 Neighboring gene arg8-vasotocin receptor-like Neighboring gene protein phosphatase 1H-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ribitol beta-1,4-xylosyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein O-linked mannosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ribitol-5-phosphate xylosyltransferase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081202.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    8048900..8061545 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034032483.3 → XP_033888374.3  ribitol-5-phosphate xylosyltransferase 1

Nucleotide Protein
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