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LOC117417136 F-box-like/WD repeat-containing protein TBL1XR1 [ Acipenser ruthenus (sterlet) ]

Gene ID: 117417136, updated on 6-Jun-2024

Summary

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Gene symbol
LOC117417136
Gene description
F-box-like/WD repeat-containing protein TBL1XR1
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
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Genomic context

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See LOC117417136 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
16
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 12 NC_081200.1 (11201186..11271064, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 11 NC_048333.1 (10977574..11043028, complement)

Chromosome 12 - NC_081200.1Genomic Context describing neighboring genes Neighboring gene neuroligin-1 Neighboring gene uncharacterized LOC117416974 Neighboring gene calcium-activated potassium channel subunit beta-2-like Neighboring gene zinc finger matrin-type protein 3-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transcription corepressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of histone deacetylase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
F-box-like/WD repeat-containing protein TBL1XR1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081200.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    11201186..11271064 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059034531.1 → XP_058890514.1  F-box-like/WD repeat-containing protein TBL1XR1 isoform X1

    UniProtKB/TrEMBL
    A0A444TZ78

  2. XM_059034530.1 → XP_058890513.1  F-box-like/WD repeat-containing protein TBL1XR1 isoform X1

    UniProtKB/TrEMBL
    A0A444TZ78

  3. XM_059034533.1 → XP_058890516.1  F-box-like/WD repeat-containing protein TBL1XR1 isoform X2

    UniProtKB/TrEMBL
    A0A444TZ78

  4. XM_059034532.1 → XP_058890515.1  F-box-like/WD repeat-containing protein TBL1XR1 isoform X2

    UniProtKB/TrEMBL
    A0A444TZ78
Nucleotide Protein
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