U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC117416617 CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like [ Acipenser ruthenus (sterlet) ]

Gene ID: 117416617, updated on 10-Oct-2024

Summary

Go to the top of the page Help
Gene symbol
LOC117416617
Gene description
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See LOC117416617 in Genome Data Viewer
Location:
chromosome: 12
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 12 NC_081200.1 (36266998..36347696, complement)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 11 NC_048333.1 (36955112..37045703, complement)

Chromosome 12 - NC_081200.1Genomic Context describing neighboring genes Neighboring gene prostaglandin E2 receptor EP4 subtype-like Neighboring gene neurturin Neighboring gene lysine-specific demethylase 4A-like Neighboring gene receptor-type tyrosine-protein phosphatase F

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables sialyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein glycosylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081200.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    36266998..36347696 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_059034992.1 → XP_058890975.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X1

  2. XM_059034995.1 → XP_058890978.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X4

  3. XM_059034991.1 → XP_058890974.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X1

  4. XM_059034993.1 → XP_058890976.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X1

  5. XM_034027875.3 → XP_033883766.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X3

    UniProtKB/TrEMBL
    A0A444U3P5
    Conserved Domains (1) summary
    pfam00777
    Location:91 → 356
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)

  6. XM_034027873.3 → XP_033883764.1  CMP-N-acetylneuraminate-beta-1,4-galactoside alpha-2,3-sialyltransferase-like isoform X2

    UniProtKB/TrEMBL
    A0A444U3P5
    Conserved Domains (1) summary
    pfam00777
    Location:107 → 372
    Glyco_transf_29; Glycosyltransferase family 29 (sialyltransferase)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.

Molecular Biology Databases