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cog5 component of oligomeric golgi complex 5 [ Acipenser ruthenus (sterlet) ]

Gene ID: 117414470, updated on 19-Mar-2024

Summary

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Gene symbol
cog5
Gene description
component of oligomeric golgi complex 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Acipenser ruthenus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Chondrostei; Acipenseriformes; Acipenseridae; Acipenser
Orthologs
human zebrafish all
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Genomic context

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See cog5 in Genome Data Viewer
Location:
chromosome: 7
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_08 current fAciRut3.2 maternal haplotype (GCF_902713425.1) 7 NC_081195.1 (50432637..50533240)
101 previous assembly ASM1064508v1 (GCF_010645085.1) 7 NC_048329.1 (18568628..18667265, complement)

Chromosome 7 - NC_081195.1Genomic Context describing neighboring genes Neighboring gene pendrin-like Neighboring gene B-cell receptor-associated protein 29-like Neighboring gene dihydrouridine synthase 4-like (S. cerevisiae) Neighboring gene G-protein coupled receptor 22-like Neighboring gene HMG box-containing protein 1-like Neighboring gene cAMP-dependent protein kinase type II-beta regulatory subunit-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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Related articles in PubMed

  1. TreeGrafter: phylogenetic tree-based annotation of proteins with Gene Ontology terms and other annotations. Tang H, et al. Bioinformatics, 2019 Feb 1. PMID 30032202, Free PMC Article

GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in intra-Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of Golgi transport complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
conserved oligomeric Golgi complex subunit 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_902713425.1-RS_2023_08

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference fAciRut3.2 maternal haplotype Primary Assembly

Genomic

  1. NC_081195.1 Reference fAciRut3.2 maternal haplotype Primary Assembly

    Range
    50432637..50533240
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_034024226.3 → XP_033880117.1  conserved oligomeric Golgi complex subunit 5

    UniProtKB/TrEMBL
    A0A662YZ47
    Conserved Domains (1) summary
    pfam10392
    Location:31 → 153
    COG5; Golgi transport complex subunit 5
Nucleotide Protein
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